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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015836788.1_cds_XP_016506433.1_19659
CDS Infomation

[gene=LOC107824203] [db_xref=GeneID:107824203] [protein=subtilisin-like protease SBT5.3] [protein_id=XP_016506433.1] [location=complement(join(10455..10990,11138..11351,11454..11568,11683..11928,12121..12218,12340..12880,13919..14027,17714..17878,18223..18320,18419..18528,18694..18765))] [gbkey=CDS]
Sequence

ATGAAAATAACGATATGTCTTCTTTCATGTTTTTTGGCTCTATTGTTTACACCCACATTT
GCCATAAAAAAGTCATACGTGGTGTACATGGGTGCACATTCACATGGAAAAGACGCATCA
TCCATTGATTTTGATAGAGTTACTGATTCCCATCATGAGTTTCTTGGATCACACTTAGGA
AGTATTGAGAAGGCCAAGGATGCAATTTTTTACTCTTATACTAGACACATCAATGGCTTT
GCTGCTATGCTTGAGGATGAAGAAGCTGCAGCATTATCCAAGCATCCGGGGGTAGTATCA
GTATTCTTGAACAAGGGTAAGGAACTACACACAACCAGATCATGGAACTTCTTGGGGTTG
GAACATGACGGAATAATCCATGAAAGCTCTTTATGGAAAAGGGCTAAATTTGGAGAAGAC
ATCATTATTGGCAACATTGATTCTGGAGTTTGGCCTGAATCAGAAAGCTTTAGTGATGAA
GGAACGGGACCAATTCCCTCAAGGTGGAAAGGAACTTGCCAACATGGTACAGATGCCAGT
TTTAGATGCAATAGGAAGTTGATTGGAGCAAGATATTTCATCAACGGATTCGCTGCTGCA
GCAGGAGCTCTCATCAACTCCAGCTTCTACACACCACGAGACACTTTAGGGCATGGATCG
CACACATTGTCCACAGCCGGTGGTAATTTTGTGGAGGGAGCTAATATTTTTGGGTATGGC
AATGGCACAGCGAAGGGTGGATCACCACGAGCACGAGTAGCAGCTTACAAGGCTTGTTGG
CCTCCTATTATTCCAAGCGACTCGTGCACTGATGCAGATGTCTTGGCCGCCTTTGATATG
GCAATTCATGATGGTGTTGATGTGCTTTCAGTATCAATGGGAGGACTACCTGTACCATAT
GTCAATGACAGTATTGCTATCGGTTCGTTTCATGCTGTTAAGCATGGCATTGTTGTGGTA
ACCTCGGGTGGTAATTCTGGTGCTTTTCCTGGTACAATAGCCAACACTGCACCTTGGCTC
ATCACTGTCGGGGCAAGCACCATTGATCGCGTGTTTGCCAGCTATGTCATCCTGGGAAAC
AATAAGCGCTACAGAGGAGTAAGCCTTGCAACTGAAGCAGTGCCCCACGGCAAGTCCTTC
CCAATTATTACCGGCGCATCTGCTAAACTTGCCAATGCAACAGACCTAGCTGCTAATTTT
TGCATAGGTGGGACTTTGGACCCTAAGAAGACCAAGGGGGCTATTTTGGTTTGCCATAGA
GGGGGTAGTCCAGGGTTTGATAAGTGCACGCAAGCGACTTTAGTAGGCGCAGTTGGTATC
GTTATACTCAACAGTGCATTCTTTGGAAACGAAATGTATGCTGAACCTTATATCTGCCCT
GCAACGCTTATCAGTTACTCTGATGCACTTGAAGTCTTGGCTTATCTTAATTCAACAAGG
AAACCTACGGCTTACATTACTCGGCCAACAACTGAATTGGGAACAAAGCCTGCTCCAATT
GTGGCTGCATTTTCATCAATTGGGCCCAACAGGGTTACACCAGAGATACTTAAGCCTGAT
ATCATTGCCCCAGGAGTGAGCATAATAGCTGCTTATACTGGAGTACAACCGCCTACACAA
ATGGGTTTTGATGATCGCCGGGTTAAATTTAACACAATGACAGGCACTTCAATGTCATGT
CCTCATGTTGCTGGTGTCGTTGGCCTTTTGAAAGCGCTCCATCCAACTTGGAGTGCTGCA
GCCATCAAATCTGCCATTATGACCTCCGCAAGAACGCGAGATAATACTTTCAAGCCAATG
ACTAATTCAACTAACCTTAAGGTAACACCATTTGCATATGGAGCGGGAAACATATGGCCA
AACCGCGCCATGGACCCTGGCTTGGTTTATGACTTGACGATCGATGATTATATGAGCTTT
CTCTGTGCCCAAGGCTACAATGAAACTCAAATCAATATCTTCTCACAAGGGTACTTCAAA
TGTCCCGAGCCAATTAGTTTCATCAATTTGAACTTACCCTCAATCACAGTGCCCAAGCTC
AATGGCTCAGTCGTTGTGACTAGAACTTTGAAGAATGTAGGATCACCGGGCACTTACAAA
GCTCGTATTCGCTCCCCAGCTGGAATTTCTGTTGTTATTGAACCAAACACTTTGGAATTC
AACAAGATTGGAGAGGAGAAATCTTTCAAGCTAACTCTGAAAGTTAGAGGAAATAAAGCT
CCAAAAGATTATGTGTTTGGGCAGTTAATATGGTCTGATGGCAAGCACAATGTTAGAAGT
CCCATTGTAGTGAAAGCTAGTTAA

Peptide Sequence

PEP ID

XP_016506433.1
PEP Infomation

PREDICTED: subtilisin-like protease SBT5.3 [Nicotiana tabacum]
Sequence

MKITICLLSCFLALLFTPTFAIKKSYVVYMGAHSHGKDASSIDFDRVTDSHHEFLGSHLG
SIEKAKDAIFYSYTRHINGFAAMLEDEEAAALSKHPGVVSVFLNKGKELHTTRSWNFLGL
EHDGIIHESSLWKRAKFGEDIIIGNIDSGVWPESESFSDEGTGPIPSRWKGTCQHGTDAS
FRCNRKLIGARYFINGFAAAAGALINSSFYTPRDTLGHGSHTLSTAGGNFVEGANIFGYG
NGTAKGGSPRARVAAYKACWPPIIPSDSCTDADVLAAFDMAIHDGVDVLSVSMGGLPVPY
VNDSIAIGSFHAVKHGIVVVTSGGNSGAFPGTIANTAPWLITVGASTIDRVFASYVILGN
NKRYRGVSLATEAVPHGKSFPIITGASAKLANATDLAANFCIGGTLDPKKTKGAILVCHR
GGSPGFDKCTQATLVGAVGIVILNSAFFGNEMYAEPYICPATLISYSDALEVLAYLNSTR
KPTAYITRPTTELGTKPAPIVAAFSSIGPNRVTPEILKPDIIAPGVSIIAAYTGVQPPTQ
MGFDDRRVKFNTMTGTSMSCPHVAGVVGLLKALHPTWSAAAIKSAIMTSARTRDNTFKPM
TNSTNLKVTPFAYGAGNIWPNRAMDPGLVYDLTIDDYMSFLCAQGYNETQINIFSQGYFK
CPEPISFINLNLPSITVPKLNGSVVVTRTLKNVGSPGTYKARIRSPAGISVVIEPNTLEF
NKIGEEKSFKLTLKVRGNKAPKDYVFGQLIWSDGKHNVRSPIVVKAS

Transcript Sequence

Gene sequence data has not been registered.